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Oligo annealing

Procedure

  1. Prepare a buffer. It's a good idea to use a buffer that is similar to where you will use your annealed fragment. Common options:
    • 10 mM Tris, 50 mM NaCl, 1 mM EDTA (pH 8.0)
    • 60 mM KCl, 6 mM HEPES (pH 7.5), 0.2 mM MgCl2
    • 100 mM NaPO4, 150 mM NaCl, 1 mM EDTA (pH 7.5)
    • Duplex Buffer: 100 mM K acetate, 30 mM HEPES (pH 7.5)
  2. Run annealing in a thermocycler:
    1. 95C for 5 min
    2. -0.1 C/s until the sample gets to room temperature (or 4C)

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